STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7CKJ8_PHAVUDHQ_synthase domain-containing protein. (442 aa)    
Predicted Functional Partners:
V7BG35_PHAVU
Uncharacterized protein.
 
 
 
 0.956
V7AUJ8_PHAVU
Phospho-2-dehydro-3-deoxyheptonate aldolase.
  
 0.955
V7B9S5_PHAVU
Phospho-2-dehydro-3-deoxyheptonate aldolase.
  
 0.955
V7BTN3_PHAVU
Phospho-2-dehydro-3-deoxyheptonate aldolase.
  
 0.955
V7C7R4_PHAVU
Uncharacterized protein.
   
 
 0.944
V7CPY3_PHAVU
Uncharacterized protein.
   
 
 0.944
V7BPY8_PHAVU
Shikimate_dh_N domain-containing protein.
     
 0.942
V7AMX2_PHAVU
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
 
 
  
 0.941
V7BCX4_PHAVU
Chorismate synthase.
  
 
 0.845
V7CQX9_PHAVU
Uncharacterized protein.
 
 
 0.773
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.