STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V7D2T7_PHAVUUncharacterized protein. (882 aa)    
Predicted Functional Partners:
V7BUX3_PHAVU
Peptidylprolyl isomerase.
    
 
 0.804
V7CGW4_PHAVU
Ubiquitin-like domain-containing protein.
   
   0.573
V7CIA8_PHAVU
Uncharacterized protein.
   
  
 0.566
V7B091_PHAVU
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
   0.564
V7B1S5_PHAVU
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
    0.550
V7AR71_PHAVU
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.548
V7BDH8_PHAVU
Ribosomal_L7Ae domain-containing protein.
    
 
 0.548
V7BVJ6_PHAVU
Uncharacterized protein.
    
 
 0.548
V7C0H6_PHAVU
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.548
V7AE69_PHAVU
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
    
   0.546
Your Current Organism:
Phaseolus vulgaris
NCBI taxonomy Id: 3885
Other names: French bean, P. vulgaris, Phaseolus vulgaris L., kidney bean, string bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.