STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0065Low molecular weight phosphotyrosine protein phosphatase, putative; GC: 44.68%; Codon Adaptation Index (CAI): 0.79. Curator(s): J. Alves; Protein involved in protein amino acid dephosphorylation; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (140 aa)    
Predicted Functional Partners:
SSA_0066
Conserved hypothetical protein; GC: 44.2%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.79. Curator(s): J. Alves.
  
    0.858
SSA_0067
Acyltransferase (yrhL-like subfamily of SGNH-hydrolases), putative; GC: 45.96%; Transmembrane domains: 12. Codon Adaptation Index (CAI): 0.782. Curator(s): J. Alves; Protein involved in transferase activity, transferring groups other than amino-acyl groups.
  
    0.855
ruvB
Holliday junction DNA helicase ruvB, putative; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
     
 0.678
SSA_2023
Fructan beta-fructosidase precursor, putative; GC: 46.44%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.779. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999).
  
 
 0.663
SSA_1490
Ribonuclease BN, putative; GC: 42.21%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.781; Protein involved in ribonuclease activity.
  
  
 0.659
adhE
Alcohol-acetaldehyde dehydrogenase, putative; GC: 45.69%; Codon Adaptation Index (CAI): 0.794. Curator(s): J. Alves; Protein involved in oxidoreductase activity; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
       0.656
scrB
Sucrose-6-phosphate hydrolase, putative; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.573
dps
DNA Protection System, DNA-binding ferritin-like protein (oxidative damage protectant), putative; GC: 42.25%; Codon Adaptation Index (CAI): 0.828. Curator(s): P. Xu, J. Alves; Protein involved in ferric iron binding and response to stress; Belongs to the Dps family.
  
  
 0.521
SSA_0064
Conserved hypothetical protein; GC: 45.44%; Codon Adaptation Index (CAI): 0.79. Curator(s): J. Alves.
       0.501
yajC
Preprotein translocase subunit YajC, putative; GC: 45.24%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.814. LipoP prediction: SpI. Curator(s): J. Alves.
     
 0.480
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.