STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glkROK family protein, putative; GC: 46.67%; Codon Adaptation Index (CAI): 0.804. Curator(s): J. Alves; Protein involved in transferase activity and kinase activity. (294 aa)    
Predicted Functional Partners:
SSA_0078
N-acetylneuraminate lyase, putative; GC: 46.51%; Codon Adaptation Index (CAI): 0.782. Curator(s): J. Alves; Protein involved in lyase activity.
 
 
 0.930
nanE
N-acetylmannosamine-6-p hosphate 2-epimerase 1, putative; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
 0.927
ptsG
PTS system glucose-specific EIIC BA component (EIICBA-Glc) (EII- Glc/EIII-Glc), putative; GC: 43.23%; Transporter classification TC:4.A.1.1.2. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.798.
  
 
 0.907
SSA_0379
PTS system, beta-glucoside-specific EII component, putative; GC: 44.98%; Transporter classification TC:4.A.1.2.6. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.805. Curator(s): T. Kitten.
  
 
 0.893
scrA
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific, putative; GC: 42.12%; Transporter classification TC:4.A.1.2.1. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.809. Curator(s): M. Chaplin.
  
 
 0.893
SSA_1752
Phosphotransferase system, trehalose-specific IIBC component, putative; GC: 44.53%; Transporter classification TC:4.A.1.2.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.774.
  
 
 0.893
nagB
Glucosamine-6-phosphate deaminase, putative; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
 
   
 0.779
SSA_0267
ROK family protein, putative; GC: 46.78%; Codon Adaptation Index (CAI): 0.767. Curator(s): P. Manque; Protein involved in regulation of transcription, DNA-dependent.
 
     0.762
blpT
Superfamily I DNA and RNA helicases, putative; GC: 40%; Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves.
       0.625
SSA_0073
Conserved hypothetical protein; GC: 31.13%; Codon Adaptation Index (CAI): 0.778. Curator(s): J. Alves; Protein involved in molecular function unknown.
 
    0.609
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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