STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0101Conserved uncharacterized protein; GC: 48.17%; Codon Adaptation Index (CAI): 0.81. Curator(s): M. Serrano. (145 aa)    
Predicted Functional Partners:
cysD
O-acetylhomoserine sulfhydrylase, putative; GC: 47.07%; Codon Adaptation Index (CAI): 0.799. Curator(s): L. Ozaki; Protein involved in transferase activity, transferring alkyl or aryl (other than methyl) groups and cellodextrin phosphorylase activity.
      0.898
SSA_0102
Kinase, putative; GC: 46.78%; Codon Adaptation Index (CAI): 0.758. Curator(s): M. Serrano; Protein involved in kinase activity.
       0.855
fur
Fe2+/Zn2+ uptake regulation protein, putative; GC: 47.07%; Codon Adaptation Index (CAI): 0.786. Curator(s): P. Xu; Protein involved in regulation of transcription, DNA-dependent; Belongs to the Fur family.
  
    0.783
polA
DNA polymerase I - 3'-5' exonuclease and polymerase domains, putative; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.663
opuAb
ABC transporter, glycine-betaine/proline permease protein, putative; GC: 49.22%; Transporter classification TC:3.A.1.12.5. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.772. Curator(s): T. Kitten.
 
     0.452
proW
ABC-type choline transporter, membrane-spanning permease, putative; GC: 43.98%; Transporter classification TC:3.A.1.12.4. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.771. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten.
       0.419
metB
Cystathionine gamma-synthase, putative; GC: 45.6%; Codon Adaptation Index (CAI): 0.784; Protein involved in amino acid metabolism.
 
      0.406
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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