STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0102Kinase, putative; GC: 46.78%; Codon Adaptation Index (CAI): 0.758. Curator(s): M. Serrano; Protein involved in kinase activity. (170 aa)    
Predicted Functional Partners:
SSA_0101
Conserved uncharacterized protein; GC: 48.17%; Codon Adaptation Index (CAI): 0.81. Curator(s): M. Serrano.
       0.855
SSA_0474
Uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase, putative; GC: 50.07%; Codon Adaptation Index (CAI): 0.77. Curator(s): M. Chaplin; Protein involved in transferase activity.
  
  
 0.799
cysK
Cysteine synthase, putative; GC: 47.42%; Codon Adaptation Index (CAI): 0.797; Protein involved in lyase activity and cysteine biosynthesis; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.617
polA
DNA polymerase I - 3'-5' exonuclease and polymerase domains, putative; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.611
SSA_0240
Acetyltransferase, GNAT family, putative; GC: 45.65%; Codon Adaptation Index (CAI): 0.774. Curator(s): P. Manque; Protein involved in transferase activity.
  
     0.492
SSA_0483
Siroheme synthase, putative; GC: 50.46%; Codon Adaptation Index (CAI): 0.724. Curator(s): M. Chaplin; Protein involved in NAD binding.
  
  
 0.485
metS
Methionyl-tRNA synthetase, putative; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
      
 0.472
SSA_1021
Conserved uncharacterized protein; GC: 47.18%; Codon Adaptation Index (CAI): 0.778.
       0.450
nrdI
Ribonucleotide reductase (NrdI family protein), putative; GC: 43.56%; Codon Adaptation Index (CAI): 0.824. Curator(s): J. Alves; Belongs to the NrdI family.
       0.450
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.