SSA_0163 protein (Streptococcus sanguinis SK36)

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SSA_0163

Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves. (111 aa)

Predicted Functional Partners:

SSA_0164

0.732

SSA_0165

0.672

SSA_0162

0.576

SSA_0160

0.572

SSA_0161

0.572

SSA_0166

0.466

Your Current Organism:

Streptococcus sanguinis SK36

NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
SSA_0160	SSA_0161	Conserved hypothetical protein; GC: 40.57%; Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 43.5%; Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano, J. Alves.	0.855
SSA_0160	SSA_0162	Conserved hypothetical protein; GC: 40.57%; Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.	Hypothetical protein; GC: 41.7%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496); Curator(s): M. Serrano, J. Alves.	0.768
SSA_0160	SSA_0163	Conserved hypothetical protein; GC: 40.57%; Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.	Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves.	0.572
SSA_0160	SSA_0164	Conserved hypothetical protein; GC: 40.57%; Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 45.49%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.993); Curator(s): M. Serrano, J. Alves; possible function in cell wall glycoprotein metabolism.	0.735
SSA_0160	SSA_0165	Conserved hypothetical protein; GC: 40.57%; Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 41.58%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.725. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999); Curator(s): M. Serrano, J. Alves.	0.711
SSA_0161	SSA_0160	Conserved hypothetical protein; GC: 43.5%; Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 40.57%; Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.	0.855
SSA_0161	SSA_0162	Conserved hypothetical protein; GC: 43.5%; Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano, J. Alves.	Hypothetical protein; GC: 41.7%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496); Curator(s): M. Serrano, J. Alves.	0.768
SSA_0161	SSA_0163	Conserved hypothetical protein; GC: 43.5%; Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano, J. Alves.	Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves.	0.572
SSA_0161	SSA_0164	Conserved hypothetical protein; GC: 43.5%; Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 45.49%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.993); Curator(s): M. Serrano, J. Alves; possible function in cell wall glycoprotein metabolism.	0.751
SSA_0161	SSA_0165	Conserved hypothetical protein; GC: 43.5%; Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 41.58%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.725. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999); Curator(s): M. Serrano, J. Alves.	0.709
SSA_0162	SSA_0160	Hypothetical protein; GC: 41.7%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496); Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 40.57%; Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.	0.768
SSA_0162	SSA_0161	Hypothetical protein; GC: 41.7%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496); Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 43.5%; Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano, J. Alves.	0.768
SSA_0162	SSA_0163	Hypothetical protein; GC: 41.7%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496); Curator(s): M. Serrano, J. Alves.	Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves.	0.576
SSA_0162	SSA_0164	Hypothetical protein; GC: 41.7%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496); Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 45.49%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.993); Curator(s): M. Serrano, J. Alves; possible function in cell wall glycoprotein metabolism.	0.547
SSA_0162	SSA_0165	Hypothetical protein; GC: 41.7%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496); Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 41.58%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.725. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999); Curator(s): M. Serrano, J. Alves.	0.506
SSA_0163	SSA_0160	Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 40.57%; Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.	0.572
SSA_0163	SSA_0161	Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 43.5%; Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano, J. Alves.	0.572
SSA_0163	SSA_0162	Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves.	Hypothetical protein; GC: 41.7%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496); Curator(s): M. Serrano, J. Alves.	0.576
SSA_0163	SSA_0164	Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 45.49%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.993); Curator(s): M. Serrano, J. Alves; possible function in cell wall glycoprotein metabolism.	0.732
SSA_0163	SSA_0165	Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves.	Conserved hypothetical protein; GC: 41.58%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.725. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999); Curator(s): M. Serrano, J. Alves.	0.672

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