STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0164Conserved hypothetical protein; GC: 45.49%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.993); Curator(s): M. Serrano, J. Alves; possible function in cell wall glycoprotein metabolism. (479 aa)    
Predicted Functional Partners:
SSA_0165
Conserved hypothetical protein; GC: 41.58%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.725. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999); Curator(s): M. Serrano, J. Alves.
       0.821
ftsX
Cell division protein FtsX, putative; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.771
SSA_0161
Conserved hypothetical protein; GC: 43.5%; Codon Adaptation Index (CAI): 0.788. Curator(s): M. Serrano, J. Alves.
  
  
 0.751
SSA_0160
Conserved hypothetical protein; GC: 40.57%; Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.
       0.735
SSA_0163
Hypothetical protein; GC: 41.37%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.743. Curator(s): M. Serrano, J. Alves.
       0.732
SSA_0162
Hypothetical protein; GC: 41.7%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.785. SignalP prediction: Yes (prob. 0.496); Curator(s): M. Serrano, J. Alves.
       0.547
iga
IgA-specific metalloendopeptidase; GC: 40.46%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.765. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): J. Alves; Protein involved in hydrolase activity.
  
  
 0.534
ftsE
Cell division protein FtsE, putative; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.505
SSA_0166
Hypothetical protein; GC: 39.67%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.748. Curator(s): M. Serrano, J. Alves.
       0.489
SSA_0155
Conserved hypothetical protein; GC: 40.98%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.721. Curator(s): M. Serrano, J. Alves.
       0.450
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.