Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SSA_0193CAAX amino terminal protease family protein, putative; GC: 39.23%; Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.758. SignalP prediction: Yes (prob. 0.652); Curator(s): M. Serrano, J. Alves. (225 aa)    
Predicted Functional Partners:
SSA_0766
Conserved hypothetical protein; GC: 39.45%; Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.775. SignalP prediction: Yes (prob. 0.469); Curator(s): X. Ge.
  
     0.698
SSA_0195
Hypothetical protein; GC: 45.54%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.762. Curator(s): M. Serrano.
     
0.540
folP
Dihydropteroate synthase, putative; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
     
 0.473
ackA
Acetate kinase, putative; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.452
SSA_0765
Conserved hypothetical protein; GC: 39.89%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.74. SignalP prediction: Yes (prob. 0.566); Curator(s): X. Ge; Protein involved in peptidase activity.
  
     0.450
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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