STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_02397,8-dihydro-8-oxoguanine-triphosphatase, putative; GC: 45.7%; Codon Adaptation Index (CAI): 0.811. Curator(s): P. Manque; Protein involved in hydrolase activity. (150 aa)    
Predicted Functional Partners:
SSA_0240
Acetyltransferase, GNAT family, putative; GC: 45.65%; Codon Adaptation Index (CAI): 0.774. Curator(s): P. Manque; Protein involved in transferase activity.
       0.855
SSA_0238
Conserved hypothetical protein; GC: 45.65%; Codon Adaptation Index (CAI): 0.727. Curator(s): P. Manque.
       0.849
cshA
Chromosome segregation helicase, putative; GC: 50.91%; Codon Adaptation Index (CAI): 0.734. Curator(s): P. Manque.
       0.734
prmA
Ribosomal protein L11 methyltransferase, putative; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.701
SSA_0242
Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.701
SSA_2258
Conserved hypothetical protein; GC: 40.73%; Codon Adaptation Index (CAI): 0.801. Curator(s): T. Kitten.
  
     0.643
SSA_0066
Conserved hypothetical protein; GC: 44.2%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.79. Curator(s): J. Alves.
  
     0.570
YfkN
Cyclo-nucleotide phosphodiesterase, putative; GC: 48.96%; Codon Adaptation Index (CAI): 0.761. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): P. Manque; Protein involved in hydrolase activity, acting on ester bonds.
 
     0.561
mutX
Mutator protein, putative; GC: 46.24%; Codon Adaptation Index (CAI): 0.785; Protein involved in hydrolase activity; Belongs to the Nudix hydrolase family.
      
 0.542
mutL
DNA mismatch repair protein, putative; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
     
 0.526
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.