Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SSA_0258Conserved hypothetical protein; GC: 47.27%; Codon Adaptation Index (CAI): 0.787. Curator(s): P. Manque. (365 aa)    
Predicted Functional Partners:
SSA_2188
Conserved uncharacterized protein; GC: 43.12%; Codon Adaptation Index (CAI): 0.803.
  
     0.626
gtfP
Glucosyltransferase, putative; GC: 44.13%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.796. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998); Curator(s): P. Xu; Protein involved in transferase activity and dextransucrase activity.
  
     0.597
SSA_0893
ATP-binding cassette transporter-like protein, putative; GC: 44.55%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.805. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.943); Curator(s): L. Ozaki.
  
     0.567
SSA_0257
N-acetylmuramidase/lysin, putative; GC: 48.35%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): P. Manque; Protein involved in cell wall catabolism.
       0.547
SSA_0256
Metalloregulator ScaR (Fe/Mn-dependent transcriptional repressor), putative; GC: 46.6%; Codon Adaptation Index (CAI): 0.768. Curator(s): P. Manque, J. Alves; Protein involved in regulation of transcription, DNA-dependent.
     
 0.507
adcR
Multiple antibiotic resistance operon transcriptional repressor (MarR), putative; GC: 41.44%; Codon Adaptation Index (CAI): 0.796. Helix-turn-helix prediction: LysRAraC. Curator(s): M. Serrano, J. Alves; Protein involved in regulation of transcription, DNA-dependent.
  
   
 0.489
SSA_0304
Bacterial cell wall degradation (CHAP/LysM domains), putative; GC: 42.94%; Codon Adaptation Index (CAI): 0.819. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten, J. Alves; Protein involved in cell wall catabolism.
  
     0.460
SSA_0324
Conserved uncharacterized protein; GC: 46.87%; Codon Adaptation Index (CAI): 0.852. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten; Protein involved in regulation of transcription, DNA-dependent.
  
     0.444
SSA_0004
Lipoprotein, putative; GC: 33.13%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.811. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1); Curator(s): J. Alves.
  
     0.403
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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