Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SSA_0264PEP phosphonomutase-like protein, putative; GC: 49.16%; Codon Adaptation Index (CAI): 0.779. Curator(s): P. Manque. (298 aa)    
Predicted Functional Partners:
SSA_0265
ORFA, transposon ISSsa1; GC: 38.18%; Codon Adaptation Index (CAI): 0.728. Helix-turn-helix prediction: AraC. Curator(s): P. Manque; Protein involved in DNA transposition.
       0.532
SSA_0752
Conserved hypothetical protein; GC: 47.95%; Codon Adaptation Index (CAI): 0.776. Curator(s): X. Ge; Protein involved in transferase activity.
  
  
 0.504
SSA_0269
Phosphotransferase system (PTS) cellobiose-specific component IIA, putative; GC: 44.34%; Transporter classification TC:4.A.3.2.2. Codon Adaptation Index (CAI): 0.8. Curator(s): P. Manque; Protein involved in transferase activity.
 
     0.473
SSA_0270
Phosphotransferase system (PTS) cellobiose-specific, IIC component, putative; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
     0.466
pepO
Zinc metalloproteinase in scaA 5'region, putative; GC: 48.44%; Codon Adaptation Index (CAI): 0.785. Curator(s): P. Manque; Protein involved in metal ion binding and hydrolase activity.
       0.428
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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