STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0285Formate acetyltransferase 3, putative; GC: 44.84%; Codon Adaptation Index (CAI): 0.792. Curator(s): P. Manque; Protein involved in formate C-acetyltransferase activity and transferase activity. (813 aa)    
Predicted Functional Partners:
SSA_0286
Transaldolase-like protein, putative; GC: 43.95%; Codon Adaptation Index (CAI): 0.757. Curator(s): P. Manque.
 
  
 0.957
SSA_0277
Pyruvate formate-lyase 3, putative; GC: 41.29%; Codon Adaptation Index (CAI): 0.775. Curator(s): P. Manque; Protein involved in oxidoreductase activity and [formate-C-acetyltransferase]-activating enzyme.
 
  
 0.929
pflA
Pyruvate formate-lyase-activating enzyme, putative; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
 
  
 0.856
gldA
Glycerol dehydrogenase, NAD+ dependent, putative; GC: 45.57%; Codon Adaptation Index (CAI): 0.778. Curator(s): P. Manque; Protein involved in oxidoreductase activity.
  
  
 0.847
pta
Phosphate acetyltransferase, putative; GC: 45.6%; Codon Adaptation Index (CAI): 0.781; Protein involved in transferase activity.
   
 
 0.762
SSA_0279
Sugar-binding transcriptional repressor (DeoR), putative; GC: 42.28%; Codon Adaptation Index (CAI): 0.772. Helix-turn-helix prediction: AraC. Curator(s): P. Manque, J. Alves; Protein involved in transcription regulator activity.
 
     0.691
aldB
Alpha-acetolactate decarboxylase, putative; GC: 45.83%; Codon Adaptation Index (CAI): 0.808. Curator(s): L. Ozaki; Protein involved in acetolactate decarboxylase activity; Belongs to the alpha-acetolactate decarboxylase family.
      
 0.691
SSA_0278
Transcriptional repressor of sugar metabolism, GlpR/DeoR family, putative; GC: 41.4%; Codon Adaptation Index (CAI): 0.792. Helix-turn-helix prediction: AraC. Curator(s): P. Manque, J. Alves; Protein involved in regulation of transcription, DNA-dependent.
 
 
   0.685
SSA_0283
Phosphotransferase system (PTS), cellobiose-specific IIB component, putative; GC: 42.95%; Transporter classification TC:4.A.3.2.3. Codon Adaptation Index (CAI): 0.807. SignalP prediction: Yes (prob. 0.996); Curator(s): P. Manque; Protein involved in phosphoenolpyruvate-dependent sugar phosphotransferase system.
  
    0.681
SSA_0282
Phosphotransferase system (PTS), cellobiose-specific IIA component, putative; GC: 40.43%; Transporter classification TC:4.A.3.2.1. Codon Adaptation Index (CAI): 0.772. Helix-turn-helix prediction: AraC. Curator(s): P. Manque.
  
    0.657
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.