STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0367Conserved hypothetical protein; GC: 43.08%; Codon Adaptation Index (CAI): 0.77. Curator(s): T. Kitten; (possible metalloprotease); Protein involved in peptidase activity. (300 aa)    
Predicted Functional Partners:
SSA_0368
Conserved hypothetical protein; GC: 36.59%; Codon Adaptation Index (CAI): 0.793. Curator(s): T. Kitten, J. Alves.
       0.599
crpA
CshA-like fibrillar surface protein A; GC: 46.68%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.801. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): L. Ozaki, J. Alves; Protein involved in calcium ion binding and pathogenesis.
  
     0.547
crpB
CshA-like fibrillar surface protein B; GC: 46.38%; Codon Adaptation Index (CAI): 0.797. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten, J. Alves; Protein involved in pathogenesis.
  
     0.547
crpC
CshA-like fibrillar surface protein C; GC: 46.28%; Codon Adaptation Index (CAI): 0.794. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten, J. Alves; Protein involved in pathogenesis.
  
     0.547
SSA_1312
RADC-like protein, putative; GC: 35.81%; Codon Adaptation Index (CAI): 0.764.
  
     0.500
SSA_0700
Conserved hypothetical protein; GC: 32.42%; Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.704. Curator(s): P. Xu; Protein involved in peptidase activity.
  
     0.467
SSA_0714
Conserved hypothetical protein; GC: 42.61%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.729. Curator(s): X. Ge.
  
     0.458
SSA_0366
Conserved hypothetical protein; GC: 43.06%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.
       0.457
SSA_0365
Small-conductance mechanosensitive efflux channel, putative; GC: 46.06%; Transporter classification TC:1.A.23.3.1. Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.748. Curator(s): T. Kitten.
       0.427
SSA_0992
Conserved hypothetical protein; GC: 43.47%; Codon Adaptation Index (CAI): 0.772. Curator(s): T. Kitten; Protein involved in transferase activity and N-acetyltransferase activity.
  
     0.421
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.