STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pepPGC: 46.8%; Codon Adaptation Index (CAI): 0.768. Curator(s): M. Chaplin; Protein involved in hydrolase activity; Belongs to the peptidase M24B family. (353 aa)    
Predicted Functional Partners:
pepT
Peptidase T, putative; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
 
 0.820
comEB
DCMP deaminase, putative; GC: 48.08%; Codon Adaptation Index (CAI): 0.761; Protein involved in hydrolase activity.
  
  
 0.802
pepN
Aminopeptidase N, putative; GC: 45.38%; Codon Adaptation Index (CAI): 0.804. Curator(s): T. Kitten.
  
 
 0.800
pepV
Dipeptidase V, putative; GC: 43.62%; Codon Adaptation Index (CAI): 0.789; Protein involved in metallopeptidase activity.
 
 
 0.800
efp
Elongation factor P, putative; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 
 0.794
uvrA
Excinuclease ATPase subunit A, putative; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
 
    0.757
SSA_0451
Conserved uncharacterized protein; GC: 44.87%; Codon Adaptation Index (CAI): 0.764. Curator(s): M. Chaplin.
       0.736
nusB
Nitrogen utilization substance protein B, putative; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.736
pepO
Zinc metalloproteinase in scaA 5'region, putative; GC: 48.44%; Codon Adaptation Index (CAI): 0.785. Curator(s): P. Manque; Protein involved in metal ion binding and hydrolase activity.
   
  
 0.734
SSA_0751
Oligoendopeptidase F, putative; GC: 44.48%; Codon Adaptation Index (CAI): 0.8. Curator(s): X. Ge; Protein involved in proteolysis.
      
 0.692
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.