STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiMCobalamin biosynthesis protein CbiM (ABC-type cobalt transporter), putative; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (260 aa)    
Predicted Functional Partners:
cbiN
Cobalt transport protein cbiN, putative; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.995
SSA_0479
CbiQ protein, putative; GC: 43.41%; Transporter classification TC:3.A.1.18.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.791. Curator(s): M. Chaplin, T. Kitten; Protein involved in cobalt ion transporter activity and cobalt ion binding.
 
 0.995
SSA_0480
Cobalt ABC transporter, ATP-binding protein, putative; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.994
SSA_0473
Precorrin-6x reductase, putative; GC: 51.6%; Codon Adaptation Index (CAI): 0.768. Curator(s): M. Chaplin; Protein involved in precorrin-6A reductase activity.
 
  
 0.893
SSA_0471
CbiG protein, putative; GC: 50.91%; Codon Adaptation Index (CAI): 0.751. Curator(s): M. Chaplin; Protein involved in transferase activity and cobalamin biosynthesis.
 
  
 0.844
SSA_0476
Precorrin-2 C20-methyltransferase, putative; GC: 49.29%; Codon Adaptation Index (CAI): 0.778. Curator(s): M. Chaplin; Protein involved in S-adenosylmethionine-dependent methyltransferase activity, transferase activity and precorrin-2 C20-methyltransferase activity.
 
  
 0.834
SSA_0474
Uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase, putative; GC: 50.07%; Codon Adaptation Index (CAI): 0.77. Curator(s): M. Chaplin; Protein involved in transferase activity.
  
  
 0.826
SSA_0603
Cobalt transporter, putative; GC: 47.55%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.736. Curator(s): D. Akan; Protein involved in cobalt ion transporter activity.
  
 
 0.805
ecfT
Cobalt transport protein cbiQ, putative; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.805
SSA_0472
Precorrin-3B C17-methyltransferase, putative; GC: 44.9%; Codon Adaptation Index (CAI): 0.78. Curator(s): M. Chaplin; Protein involved in precorrin-3B C17-methyltransferase activity.
 
  
 0.780
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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