Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SSA_0506Iron-sulfur cluster-binding protein, putative; GC: 48.25%; Codon Adaptation Index (CAI): 0.753. Curator(s): D. Akan; Protein involved in 4 iron, 4 sulfur cluster binding. (399 aa)    
Predicted Functional Partners:
queA
S-adenosylmethio nine:tRNA-ribosyltransferase-isomerase (queuine synthetase), putative; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
 
  
 0.813
fer
Ferredoxin, putative; GC: 46.57%; Codon Adaptation Index (CAI): 0.733; Protein involved in electron transport and transport.
     
 0.581
SSA_0507
Hypothetical protein; GC: 36.29%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.779. Curator(s): D. Akan.
       0.527
prfB
Peptide chain release factor 2, putative; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.450
fbp
Firmicute fructose-1,6-bisphosphatase, putative; GC: 44.85%; Codon Adaptation Index (CAI): 0.784. Curator(s): J. Alves; Protein involved in hydrolase activity and fructose-bisphosphatase activity.
       0.450
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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