STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0509Propanediol utilization protein, putative; GC: 45.29%; Codon Adaptation Index (CAI): 0.798. Curator(s): D. Akan; Protein involved in amino acid biosynthesis and transport; Belongs to the EutP/PduV family. (144 aa)    
Predicted Functional Partners:
eutQ
Ethanolamine utilization protein eutQ (cobalamin-dependent degradation of ethanolamine), putative; GC: 46.22%; Codon Adaptation Index (CAI): 0.83. Curator(s): D. Akan, J. Alves.
 
  
 0.875
SSA_0515
Propanediol utilization protein PduU, putative; GC: 46.48%; Codon Adaptation Index (CAI): 0.757. Curator(s): D. Akan; Protein involved in ethanolamine metabolism.
 
  
 0.870
eutL
Ethanolamine utilization protein EutL, putative; GC: 47.88%; Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.931); Curator(s): D. Akan, J. Alves; Protein involved in response to external stimulus.
 
   
 0.853
EutA
Ethanolamine utilization protein EutA, putative; GC: 45.4%; Codon Adaptation Index (CAI): 0.775. Curator(s): D. Akan.
 
   
 0.825
eutH
Ethanolamine utilization protein (transporter), putative; GC: 45.57%; Transporter classification TC:9.A.28.1.1. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.787. Curator(s): D. Akan, J. Alves.
 
   
 0.788
SSA_0517
Sensor histidine kinase, putative; GC: 44.05%; Codon Adaptation Index (CAI): 0.774. Curator(s): D. Akan; Protein involved in kinase activity and transferase activity.
 
   
 0.743
SSA_0508
Conserved uncharacterized protein, possible phosphoserine phosphatase; GC: 43.89%; Codon Adaptation Index (CAI): 0.799. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1); Curator(s): D. Akan, J. Alves.
 
     0.727
SSA_0516
AmiR two-component response regulator with transcriptional antiterminator output domain, putative; GC: 42.71%; Codon Adaptation Index (CAI): 0.761. Curator(s): D. Akan, J. Alves; Protein involved in regulation of transcription and regulation of transcription, DNA-dependent.
 
   
 0.695
SSA_0513
ATP:cob(I)alamin adenosyltransferase, putative; GC: 45.17%; Codon Adaptation Index (CAI): 0.781. Curator(s): D. Akan; Protein involved in transferase activity; Belongs to the Cob(I)alamin adenosyltransferase family.
     
 0.656
SSA_0510
L-threonine-O-3-phosphate decarboxylase, putative; GC: 48.58%; Codon Adaptation Index (CAI): 0.77. Curator(s): D. Akan.
 
     0.641
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.