STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0519Ethanolamine ammonia-lyase large subunit, putative; GC: 43.76%; Codon Adaptation Index (CAI): 0.801. Curator(s): D. Akan; Protein involved in ethanolamine ammonia-lyase activity and lyase activity. (456 aa)    
Predicted Functional Partners:
eutC
Ethanolamine ammonia-lyase light chain, putative; GC: 44.52%; Codon Adaptation Index (CAI): 0.815. Curator(s): D. Akan; Protein involved in cobalt ion binding and lyase activity; Belongs to the EutC family.
 0.999
EutA
Ethanolamine utilization protein EutA, putative; GC: 45.4%; Codon Adaptation Index (CAI): 0.775. Curator(s): D. Akan.
 
 
 0.995
eutL
Ethanolamine utilization protein EutL, putative; GC: 47.88%; Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.931); Curator(s): D. Akan, J. Alves; Protein involved in response to external stimulus.
 
  
 0.955
ugpQ
Membrane-anchored glycerophosphoryl diester phosphodiesterase, putative; GC: 44.84%; Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.752. SignalP prediction: Yes (prob. 0.982); Curator(s): T. Kitten, J. Alves; Protein involved in glycerophosphodiester phosphodiesterase activity.
     
  0.900
SSA_1649
Conserved hypothetical transmembrane protein; GC: 43.02%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.765. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.589); Protein involved in glycerophosphodiester phosphodiesterase activity.
     
  0.900
SSA_0523
Aldehyde dehydrogenase, putative; GC: 44.9%; Codon Adaptation Index (CAI): 0.796. Curator(s): D. Akan; Protein involved in oxidoreductase activity.
  
  
 0.816
SSA_0522
Ethanolamine utilization protein, putative; GC: 42.38%; Codon Adaptation Index (CAI): 0.752. Curator(s): D. Akan.
  
  
 0.808
eutH
Ethanolamine utilization protein (transporter), putative; GC: 45.57%; Transporter classification TC:9.A.28.1.1. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.787. Curator(s): D. Akan, J. Alves.
 
  
 0.763
SSA_0517
Sensor histidine kinase, putative; GC: 44.05%; Codon Adaptation Index (CAI): 0.774. Curator(s): D. Akan; Protein involved in kinase activity and transferase activity.
 
     0.734
eutQ
Ethanolamine utilization protein eutQ (cobalamin-dependent degradation of ethanolamine), putative; GC: 46.22%; Codon Adaptation Index (CAI): 0.83. Curator(s): D. Akan, J. Alves.
 
  
 0.714
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.