Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SSA_0535Propanediol utilization: dehydratase, medium subunit, putative; GC: 45.74%; Codon Adaptation Index (CAI): 0.816. Curator(s): D. Akan; Protein involved in glycerol dehydratase activity and propanediol dehydratase activity. (222 aa)    
Predicted Functional Partners:
pduC
Glycerol dehydratase large subunit pduC, putative; GC: 47.41%; Codon Adaptation Index (CAI): 0.791. Curator(s): D. Akan; Protein involved in propanediol dehydratase activity.
 0.999
SSA_0536
B12-dependent diol dehydratase small subunit, putative; GC: 44.19%; Codon Adaptation Index (CAI): 0.785. Curator(s): D. Akan.
 
 0.999
pduB
Propanediol utilization protein PduB, putative; GC: 46.67%; Codon Adaptation Index (CAI): 0.806. Helix-turn-helix prediction: AraC. Curator(s): D. Akan, J. Alves; Protein involved in response to external stimulus.
 
  
 0.956
pduO
PduO protein, putative; GC: 46.67%; Codon Adaptation Index (CAI): 0.776. Curator(s): D. Akan.
 
  
 0.943
pduH
PduH protein, putative; GC: 47.24%; Codon Adaptation Index (CAI): 0.72. Curator(s): D. Akan.
 
  
 0.919
SSA_0537
Propanediol utilization:dioldehydratase reactivation, putative; GC: 47.82%; Codon Adaptation Index (CAI): 0.77. Curator(s): D. Akan.
 
  
 0.917
gldA
Glycerol dehydrogenase, NAD+ dependent, putative; GC: 45.57%; Codon Adaptation Index (CAI): 0.778. Curator(s): P. Manque; Protein involved in oxidoreductase activity.
    
 0.904
SSA_0509
Propanediol utilization protein, putative; GC: 45.29%; Codon Adaptation Index (CAI): 0.798. Curator(s): D. Akan; Protein involved in amino acid biosynthesis and transport; Belongs to the EutP/PduV family.
 
  
 0.523
SSA_0515
Propanediol utilization protein PduU, putative; GC: 46.48%; Codon Adaptation Index (CAI): 0.757. Curator(s): D. Akan; Protein involved in ethanolamine metabolism.
 
  
 0.408
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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