SSA_0622 protein (Streptococcus sanguinis SK36)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SSA_0622

XRE family transcriptional regulator; GC: 46.02%; Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu, J. Alves; Protein involved in serine-type peptidase activity. (225 aa)

Predicted Functional Partners:

SSA_0620

0.955

SSA_0618

0.855

SSA_0621

0.828

SSA_0623

0.527

SSA_1651

0.460

Your Current Organism:

Streptococcus sanguinis SK36

NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
SSA_0618	SSA_0620	Conserved hypothetical protein; GC: 40.48%; Codon Adaptation Index (CAI): 0.756. Curator(s): P. Xu.	Conserved hypothetical protein; GC: 48.27%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu.	0.855
SSA_0618	SSA_0621	Conserved hypothetical protein; GC: 40.48%; Codon Adaptation Index (CAI): 0.756. Curator(s): P. Xu.	SOS responce UmuC protein, putative; GC: 48.31%; Codon Adaptation Index (CAI): 0.751. Curator(s): P. Xu; Protein involved in DNA repair.	0.805
SSA_0618	SSA_0622	Conserved hypothetical protein; GC: 40.48%; Codon Adaptation Index (CAI): 0.756. Curator(s): P. Xu.	XRE family transcriptional regulator; GC: 46.02%; Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu, J. Alves; Protein involved in serine-type peptidase activity.	0.855
SSA_0618	SSA_0623	Conserved hypothetical protein; GC: 40.48%; Codon Adaptation Index (CAI): 0.756. Curator(s): P. Xu.	Membrane protein, putative; GC: 39.06%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.764. Curator(s): P. Xu.	0.527
SSA_0620	SSA_0618	Conserved hypothetical protein; GC: 48.27%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu.	Conserved hypothetical protein; GC: 40.48%; Codon Adaptation Index (CAI): 0.756. Curator(s): P. Xu.	0.855
SSA_0620	SSA_0621	Conserved hypothetical protein; GC: 48.27%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu.	SOS responce UmuC protein, putative; GC: 48.31%; Codon Adaptation Index (CAI): 0.751. Curator(s): P. Xu; Protein involved in DNA repair.	0.934
SSA_0620	SSA_0622	Conserved hypothetical protein; GC: 48.27%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu.	XRE family transcriptional regulator; GC: 46.02%; Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu, J. Alves; Protein involved in serine-type peptidase activity.	0.955
SSA_0620	SSA_0623	Conserved hypothetical protein; GC: 48.27%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu.	Membrane protein, putative; GC: 39.06%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.764. Curator(s): P. Xu.	0.527
SSA_0621	SSA_0618	SOS responce UmuC protein, putative; GC: 48.31%; Codon Adaptation Index (CAI): 0.751. Curator(s): P. Xu; Protein involved in DNA repair.	Conserved hypothetical protein; GC: 40.48%; Codon Adaptation Index (CAI): 0.756. Curator(s): P. Xu.	0.805
SSA_0621	SSA_0620	SOS responce UmuC protein, putative; GC: 48.31%; Codon Adaptation Index (CAI): 0.751. Curator(s): P. Xu; Protein involved in DNA repair.	Conserved hypothetical protein; GC: 48.27%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu.	0.934
SSA_0621	SSA_0622	SOS responce UmuC protein, putative; GC: 48.31%; Codon Adaptation Index (CAI): 0.751. Curator(s): P. Xu; Protein involved in DNA repair.	XRE family transcriptional regulator; GC: 46.02%; Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu, J. Alves; Protein involved in serine-type peptidase activity.	0.828
SSA_0621	SSA_0623	SOS responce UmuC protein, putative; GC: 48.31%; Codon Adaptation Index (CAI): 0.751. Curator(s): P. Xu; Protein involved in DNA repair.	Membrane protein, putative; GC: 39.06%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.764. Curator(s): P. Xu.	0.527
SSA_0622	SSA_0618	XRE family transcriptional regulator; GC: 46.02%; Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu, J. Alves; Protein involved in serine-type peptidase activity.	Conserved hypothetical protein; GC: 40.48%; Codon Adaptation Index (CAI): 0.756. Curator(s): P. Xu.	0.855
SSA_0622	SSA_0620	XRE family transcriptional regulator; GC: 46.02%; Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu, J. Alves; Protein involved in serine-type peptidase activity.	Conserved hypothetical protein; GC: 48.27%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu.	0.955
SSA_0622	SSA_0621	XRE family transcriptional regulator; GC: 46.02%; Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu, J. Alves; Protein involved in serine-type peptidase activity.	SOS responce UmuC protein, putative; GC: 48.31%; Codon Adaptation Index (CAI): 0.751. Curator(s): P. Xu; Protein involved in DNA repair.	0.828
SSA_0622	SSA_0623	XRE family transcriptional regulator; GC: 46.02%; Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu, J. Alves; Protein involved in serine-type peptidase activity.	Membrane protein, putative; GC: 39.06%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.764. Curator(s): P. Xu.	0.527
SSA_0622	SSA_1651	XRE family transcriptional regulator; GC: 46.02%; Codon Adaptation Index (CAI): 0.741. Curator(s): P. Xu, J. Alves; Protein involved in serine-type peptidase activity.	Conserved hypothetical protein; GC: 45.69%; Codon Adaptation Index (CAI): 0.775.	0.460
SSA_0623	SSA_0618	Membrane protein, putative; GC: 39.06%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.764. Curator(s): P. Xu.	Conserved hypothetical protein; GC: 40.48%; Codon Adaptation Index (CAI): 0.756. Curator(s): P. Xu.	0.527
SSA_0623	SSA_0620	Membrane protein, putative; GC: 39.06%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.764. Curator(s): P. Xu.	Conserved hypothetical protein; GC: 48.27%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu.	0.527
SSA_0623	SSA_0621	Membrane protein, putative; GC: 39.06%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.764. Curator(s): P. Xu.	SOS responce UmuC protein, putative; GC: 48.31%; Codon Adaptation Index (CAI): 0.751. Curator(s): P. Xu; Protein involved in DNA repair.	0.527

page 1 of 2

Server load: low (40%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About