STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0664Conserved uncharacterized protein; GC: 35.97%; Codon Adaptation Index (CAI): 0.798. Curator(s): P. Xu, J. Alves. (100 aa)    
Predicted Functional Partners:
SSA_0665
NTP pyrophosphohydrolases including oxidative damage repair enzymes (MutT/NUDIX family); GC: 46.67%; Codon Adaptation Index (CAI): 0.792. Curator(s): P. Xu, J. Alves; Protein involved in hydrolase activity; Belongs to the Nudix hydrolase family.
 
     0.866
malX
Maltose/maltodextrin ABC transporter, sugar-binding protein MalX, putative; GC: 42.32%; Transporter classification TC:3.A.1.1.6. Codon Adaptation Index (CAI): 0.796. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1); Protein involved in transport.
  
     0.619
SSA_0574
YdjX protein, putative; GC: 46.41%; Transporter classification TC:9.B.27.1.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.765. Conserved, possibly membrane-associated. Curator(s): D. Akan, J. Alves.
  
     0.606
SSA_1961
Amino acid ABC transporter, amino acid-binding protein/permease protein, putative; GC: 45.4%; Transporter classification TC:3.A.1.3.12. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).
  
     0.571
SSA_1844
Conserved hypothetical protein; GC: 40.52%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.787.
  
     0.563
SSA_0670
Conserved uncharacterized protein; GC: 39.83%; Codon Adaptation Index (CAI): 0.788. Curator(s): P. Xu.
 
     0.540
rpoE
DNA-directed RNA polymerase delta subunit, putative; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.490
SSA_1545
Conserved uncharacterized protein; GC: 39.6%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.799.
  
     0.460
SSA_0666
Hypothetical protein; GC: 32.41%; Codon Adaptation Index (CAI): 0.818. Curator(s): P. Xu.
       0.432
SSA_0313
Conserved uncharacterized protein; GC: 41.13%; Codon Adaptation Index (CAI): 0.813. Highly conserved, but so far Firmicutes specific. Curator(s): T. Kitten, J. Alves; Belongs to the UPF0356 family.
  
     0.423
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.