Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SSA_0711Conserved hypothetical protein; GC: 46.72%; Codon Adaptation Index (CAI): 0.765. Curator(s): P. Xu; Protein involved in transferase activity; Belongs to the methyltransferase superfamily. (248 aa)    
Predicted Functional Partners:
SSA_0709
Conserved hypothetical protein; GC: 46.59%; Codon Adaptation Index (CAI): 0.76. Curator(s): P. Xu; Protein involved in DNA repair; Belongs to the UPF0213 family.
  
  
 0.933
epsH
Exopolysaccharide biosynthesis protein, acetyltransferase, putative; GC: 43.83%; Codon Adaptation Index (CAI): 0.762. Curator(s): P. Xu; Protein involved in transferase activity.
       0.773
tmcAL
Nucleotidyltransferase, putative; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
  
     0.683
rsmI
Conserved uncharacterized protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.656
ctpE
P-type ATPase-metal cation transport (calcium efflux), putative; GC: 48.68%; Transporter classification TC:3.A.3.2.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.758. Curator(s): P. Xu, J. Alves; Protein involved in metal ion binding and hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances.
       0.584
comEA
DNA uptake protein, putative; GC: 46.11%; Transporter classification TC:3.A.11.1.1. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.777. SignalP prediction: Yes (prob. 0.536); Curator(s): X. Ge, J. Alves; Protein involved in establishment of competence for transformation.
       0.543
comEC
Competence protein, putative; GC: 43.24%; Transporter classification TC:3.A.11.1.1. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.763. Helix-turn-helix prediction: AraC. Curator(s): X. Ge, J. Alves; Protein involved in establishment of competence for transformation.
       0.543
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; GC: 42.91%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.828. SignalP prediction: Yes (prob. 0.5); Curator(s): P. Xu, J. Alves; Protein involved in acyltransferase activity and transferase activity.
       0.535
metS
Methionyl-tRNA synthetase, putative; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
 
    0.517
SSA_1840
RNA binding protein, putative; GC: 40.22%; Codon Adaptation Index (CAI): 0.814. Contains ribosomal protein S1 domain; Protein involved in RNA binding.
       0.447
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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