Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ctpEP-type ATPase-metal cation transport (calcium efflux), putative; GC: 48.68%; Transporter classification TC:3.A.3.2.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.758. Curator(s): P. Xu, J. Alves; Protein involved in metal ion binding and hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances. (779 aa)    
Predicted Functional Partners:
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase, putative; GC: 42.91%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.828. SignalP prediction: Yes (prob. 0.5); Curator(s): P. Xu, J. Alves; Protein involved in acyltransferase activity and transferase activity.
   
  0.762
SSA_0709
Conserved hypothetical protein; GC: 46.59%; Codon Adaptation Index (CAI): 0.76. Curator(s): P. Xu; Protein involved in DNA repair; Belongs to the UPF0213 family.
       0.584
SSA_0711
Conserved hypothetical protein; GC: 46.72%; Codon Adaptation Index (CAI): 0.765. Curator(s): P. Xu; Protein involved in transferase activity; Belongs to the methyltransferase superfamily.
       0.584
epsH
Exopolysaccharide biosynthesis protein, acetyltransferase, putative; GC: 43.83%; Codon Adaptation Index (CAI): 0.762. Curator(s): P. Xu; Protein involved in transferase activity.
       0.495
SSA_0819
Conserved hypothetical protein; GC: 43.13%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.76. Curator(s): L. Ozaki.
  
 
 0.457
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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