Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0729Hypothetical protein; GC: 50.25%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.68. Curator(s): X. Ge. (66 aa)    
Predicted Functional Partners:
SSA_0728
Protease, putative; GC: 48.81%; Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.728. Helix-turn-helix prediction: AraC. Curator(s): X. Ge; Protein involved in peptidase activity.
       0.773
SSA_0727
Metal-dependent membrane protease, putative; GC: 45.09%; Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.759. SignalP prediction: Yes (prob. 0.552); Curator(s): X. Ge.
       0.494
SSA_0726
FmtA-like protein, putative; GC: 45.17%; Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.728. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): X. Ge; Protein involved in response to antibiotic.
       0.436
SSA_0730
Arsenical resistance operon transcription repressor (ArsR), putative; GC: 41.85%; Codon Adaptation Index (CAI): 0.705. Curator(s): X. Ge, J. Alves; Protein involved in response to cadmium ion.
       0.434
SSA_0731
Integral membrane protein, putative; GC: 41.96%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.737. SignalP prediction: Yes (prob. 0.531); Curator(s): X. Ge.
       0.434
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.