Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
arcCCarbamate kinase, putative; GC: 45.68%; Codon Adaptation Index (CAI): 0.795. SignalP prediction: Yes (prob. 0.989); Curator(s): X. Ge; Protein involved in transferase activity; Belongs to the carbamate kinase family. (315 aa)    
Predicted Functional Partners:
arc
Ornithine carbamoyltransferase, catabolic, putative; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.998
sagP
Arginine deiminase, putative; GC: 43.25%; Codon Adaptation Index (CAI): 0.794. Curator(s): X. Ge; Protein involved in arginine deiminase activity.
 
  
 0.991
glnA
Glutamine synthetase type 1, putative; GC: 45.06%; Codon Adaptation Index (CAI): 0.803. Curator(s): T. Kitten; Protein involved in ligase activity; Belongs to the glutamine synthetase family.
     
 0.906
gdhA
NADP-specific glutamate dehydrogenase, putative; GC: 45.88%; Codon Adaptation Index (CAI): 0.789. Curator(s): T. Kitten; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.900
carB
Carbamoyl-phosphate synthase large chain, putative; GC: 49.5%; Codon Adaptation Index (CAI): 0.783; Protein involved in metal ion binding.
     
  0.900
carA
Carbamoyl-phosphate synthase small chain, putative; GC: 48.24%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.764; Protein involved in ligase activity; Belongs to the CarA family.
     
 0.900
arcT
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase, putative; GC: 48.8%; Codon Adaptation Index (CAI): 0.771. Curator(s): X. Ge, J. Alves; Protein involved in metallopeptidase activity.
     
 0.841
pyrB
Aspartate carbamoyltransferase, putative; GC: 45.75%; Codon Adaptation Index (CAI): 0.798; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.835
SSA_0740
C4-dicarboxylate anaerobic carrier, possible arginine transporter, putative; GC: 44.71%; Transporter classification TC:9.B.50.1.1. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.783. SignalP prediction: Yes (prob. 1); Curator(s): X. Ge, J. Alves.
 
   
 0.820
queA
S-adenosylmethio nine:tRNA-ribosyltransferase-isomerase (queuine synthetase), putative; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
      
 0.818
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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