STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0763Transcription repressor, putative; GC: 42.54%; Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.779. Similar to negative regulator of Streptococcus sobrinus surface protein antigen gene. Curator(s): X. Ge, J. Alves. (180 aa)    
Predicted Functional Partners:
SSA_0762
Conserved hypothetical protein; GC: 36.34%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.754. SignalP prediction: Yes (prob. 0.813); Curator(s): X. Ge.
       0.805
SSA_0765
Conserved hypothetical protein; GC: 39.89%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.74. SignalP prediction: Yes (prob. 0.566); Curator(s): X. Ge; Protein involved in peptidase activity.
       0.773
SSA_0766
Conserved hypothetical protein; GC: 39.45%; Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.775. SignalP prediction: Yes (prob. 0.469); Curator(s): X. Ge.
       0.705
SSA_0761
Transcriptional regulator, XRE family, putative; GC: 48.36%; Codon Adaptation Index (CAI): 0.695. Curator(s): X. Ge, J. Alves; Protein involved in DNA binding.
       0.652
SSA_0767
Diacylglycerol kinase catalytic domain protein, putative; GC: 44.03%; Codon Adaptation Index (CAI): 0.783. Curator(s): X. Ge; Protein involved in kinase activity and protein kinase C activation.
       0.427
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.