STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0867Conserved hypothetical protein; GC: 40.03%; Codon Adaptation Index (CAI): 0.735. Curator(s): L. Ozaki. (263 aa)    
Predicted Functional Partners:
pacL
Cation-transporting ATPase, E1-E 2 family, putative; GC: 45.43%; Transporter classification TC:3.A.3.2.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.805. Curator(s): L. Ozaki.
       0.621
SSA_1652
Acetyltransferases, putative; GC: 46.4%; Codon Adaptation Index (CAI): 0.771; Protein involved in transferase activity.
 
     0.496
ftsZ
Cell division protein FtsZ, putative; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
    0.469
SSA_0359
Trancriptional regulator, LysR-family, putative; GC: 32.37%; Codon Adaptation Index (CAI): 0.736. Curator(s): T. Kitten; Protein involved in regulation of transcription, DNA-dependent.
  
     0.463
SSA_1067
Conserved hypothetical protein; GC: 43.25%; Codon Adaptation Index (CAI): 0.766; Protein involved in N-acetyltransferase activity and transferase activity.
 
     0.459
labT
Conserved hypothetical protein; GC: 39.69%; Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.766.
  
     0.405
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.