STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0924ABC-type antimicrobial peptide transport system, permease component, putative; GC: 44.41%; Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.783. SignalP prediction: Yes (prob. 0.487); Curator(s): T. Kitten. (336 aa)    
Predicted Functional Partners:
SSA_0925
ABC-type antimicrobial peptide transport system, ATPase component, putative; GC: 48.05%; Transporter classification TC:3.A.1.114.1. Codon Adaptation Index (CAI): 0.767. Curator(s): T. Kitten; Protein involved in nucleoside-triphosphatase activity.
 
 0.998
SSA_0926
Histone acetyltransferase HPA2, putative; GC: 45.08%; Codon Adaptation Index (CAI): 0.758. Curator(s): T. Kitten; Protein involved in N-acetyltransferase activity and transferase activity.
       0.613
SSA_0606
ABC-type antimicrobial peptide transport system, ATPase component, putative; GC: 49.33%; Transporter classification TC:3.A.1.122.1. Codon Adaptation Index (CAI): 0.735. Curator(s): D. Akan, J. Alves; Protein involved in nucleoside-triphosphatase activity.
  
 
 0.608
SSA_0894
ATP-binding cassette protein, putative; GC: 47.11%; Transporter classification TC:3.A.1.122.1. Codon Adaptation Index (CAI): 0.767. Curator(s): L. Ozaki; Protein involved in nucleoside-triphosphatase activity.
  
 
 0.608
salX
ABC-type antimicrobial peptide transporter, ATPase component, putative; GC: 47.21%; Transporter classification TC:3.A.1.122.1. Codon Adaptation Index (CAI): 0.794. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.
  
 
 0.608
SSA_1589
ABC-type antimicrobial peptide transport system, ATPase component, putative; GC: 47.15%; Transporter classification TC:3.A.1.125.1. Codon Adaptation Index (CAI): 0.766. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.
  
 
 0.577
SSA_1660
ABC-type antimicrobial peptide transport system, ATPase component, putative; GC: 48.95%; Transporter classification TC:3.A.1.123.4. Codon Adaptation Index (CAI): 0.752. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.
  
 
 0.577
SSA_1681
ABC-type bacitracin resistance protein A, ATPase component, putative; GC: 48.46%; Transporter classification TC:3.A.1.123.4. Codon Adaptation Index (CAI): 0.754. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.
  
 
 0.577
SSA_2249
ABC-type antimicrobial peptide transporter, ATPase component, putative; GC: 32.21%; Transporter classification TC:3.A.1.122.1. Codon Adaptation Index (CAI): 0.731. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.
  
 
 0.577
SSA_0923
Transcriptional regulator, TetR/AcrR family, putative; GC: 43.51%; Codon Adaptation Index (CAI): 0.788. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten, J. Alves; Protein involved in regulation of transcription and regulation of transcription, DNA-dependent.
  
    0.508
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.