Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SSA_0932Conserved hypothetical protein; GC: 45.83%; Codon Adaptation Index (CAI): 0.769. Curator(s): T. Kitten, J. Alves. (423 aa)    
Predicted Functional Partners:
SSA_0933
Acetyltransferase, GNAT family, putative; GC: 39.64%; Codon Adaptation Index (CAI): 0.763. Curator(s): T. Kitten; Protein involved in transferase activity.
       0.849
truB
tRNA pseudouridine synthase B, putative; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.797
SSA_0934
HydD, putative; GC: 39.93%; Codon Adaptation Index (CAI): 0.764. Curator(s): T. Kitten; Protein involved in hydrolase activity and prolyl aminopeptidase activity.
       0.724
mreA
FAD synthase, putative; GC: 46.2%; Codon Adaptation Index (CAI): 0.793. Curator(s): T. Kitten; Protein involved in riboflavin biosynthesis; Belongs to the ribF family.
       0.638
arsC
Arsenate reductase, glutaredoxin family, putative; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.
       0.529
SSA_0938
Conserved hypothetical protein; GC: 40.86%; Codon Adaptation Index (CAI): 0.774. Curator(s): T. Kitten; Protein involved in molecular function unknown; Belongs to the UPF0223 family.
       0.522
suhB
Inositol monophosphatase (Mg++ dependent), putative; GC: 46.69%; Codon Adaptation Index (CAI): 0.769. Curator(s): T. Kitten, J. Alves; Protein involved in inositol or phosphatidylinositol phosphatase activity.
       0.522
SSA_1019
Collagen-binding surface protein, putative; GC: 42.42%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.8. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).
  
     0.490
SSA_1823
Conserved hypothetical protein; GC: 49.12%; Codon Adaptation Index (CAI): 0.763. Curator(s): J. Alves.
       0.450
SSA_2038
Conserved hypothetical protein; GC: 49.43%; Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.738. SignalP prediction: Yes (prob. 0.843).
       0.450
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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