STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0934HydD, putative; GC: 39.93%; Codon Adaptation Index (CAI): 0.764. Curator(s): T. Kitten; Protein involved in hydrolase activity and prolyl aminopeptidase activity. (267 aa)    
Predicted Functional Partners:
truB
tRNA pseudouridine synthase B, putative; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.811
SSA_0932
Conserved hypothetical protein; GC: 45.83%; Codon Adaptation Index (CAI): 0.769. Curator(s): T. Kitten, J. Alves.
       0.724
SSA_0933
Acetyltransferase, GNAT family, putative; GC: 39.64%; Codon Adaptation Index (CAI): 0.763. Curator(s): T. Kitten; Protein involved in transferase activity.
       0.674
SSA_1928
Acyl-CoA dehydrogenase, putative; GC: 47.89%; Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves.
  
 0.567
mreA
FAD synthase, putative; GC: 46.2%; Codon Adaptation Index (CAI): 0.793. Curator(s): T. Kitten; Protein involved in riboflavin biosynthesis; Belongs to the ribF family.
     
 0.464
SSA_2124
Dehydrogenase, eukaryotic-like, putative; GC: 38.48%; Codon Adaptation Index (CAI): 0.784. Curator(s): J. Alves; Protein involved in oxidoreductase activity.
  
  0.454
SSA_1366
Alkaline D-stereospecific endopeptidase precursor, putative; GC: 47%; Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.763; Protein involved in response to antibiotic.
  
     0.408
SSA_0916
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, putative; GC: 41.43%; Codon Adaptation Index (CAI): 0.751. Curator(s): T. Kitten; Protein involved in hydrolase activity.
  
     0.401
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.