STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0957Dehydrogenase, putative; GC: 37.62%; Codon Adaptation Index (CAI): 0.74. Dehydrogenases with different specificities, related to short-chain alcohol dehydrogenases. Curator(s): T. Kitten; Protein involved in oxidoreductase activity. (271 aa)    
Predicted Functional Partners:
SSA_1325
Ketoacyl reductase hetN, putative; GC: 48.77%; Codon Adaptation Index (CAI): 0.722; Protein involved in oxidoreductase activity.
  
     0.641
SSA_1429
Conserved hypothetical protein; GC: 44.71%; Codon Adaptation Index (CAI): 0.763; Protein involved in oxidoreductase activity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.507
SSA_0958
Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.
       0.454
SSA_2124
Dehydrogenase, eukaryotic-like, putative; GC: 38.48%; Codon Adaptation Index (CAI): 0.784. Curator(s): J. Alves; Protein involved in oxidoreductase activity.
 
 
 0.444
uppS
Undecaprenyl pyrophosphate synthetase, putative; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.425
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.