SSA_0958 protein (Streptococcus sanguinis SK36)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SSA_0958

Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten. (154 aa)

Predicted Functional Partners:

ciaR

0.786

ciaH

0.709

SSA_0961

0.494

SSA_0957

0.454

Your Current Organism:

Streptococcus sanguinis SK36

NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SSA_0957	SSA_0958	SSA_0957	SSA_0958	Dehydrogenase, putative; GC: 37.62%; Codon Adaptation Index (CAI): 0.74. Dehydrogenases with different specificities, related to short-chain alcohol dehydrogenases. Curator(s): T. Kitten; Protein involved in oxidoreductase activity.	Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.	0.454
SSA_0958	SSA_0957	SSA_0958	SSA_0957	Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.	Dehydrogenase, putative; GC: 37.62%; Codon Adaptation Index (CAI): 0.74. Dehydrogenases with different specificities, related to short-chain alcohol dehydrogenases. Curator(s): T. Kitten; Protein involved in oxidoreductase activity.	0.454
SSA_0958	SSA_0961	SSA_0958	SSA_0961	Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.	Possible ketopantoate reductase PanE/ApbA, putative; GC: 39.3%; Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten; Protein involved in 2-dehydropantoate 2-reductase activity.	0.494
SSA_0958	ciaH	SSA_0958	SSA_0960	Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.	Sensor protein ciaH, putative; GC: 41.74%; Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.823. Curator(s): T. Kitten; Protein involved in transferase activity, transferring phosphorus-containing groups and establishment of competence for transformation.	0.709
SSA_0958	ciaR	SSA_0958	SSA_0959	Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.	Two-component system, OmpR family, response regulator CiaR; GC: 40.59%; Codon Adaptation Index (CAI): 0.791. Curator(s): T. Kitten, J. Alves; Protein involved in sensory perception and establishment of competence for transformation.	0.786
SSA_0961	SSA_0958	SSA_0961	SSA_0958	Possible ketopantoate reductase PanE/ApbA, putative; GC: 39.3%; Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten; Protein involved in 2-dehydropantoate 2-reductase activity.	Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.	0.494
SSA_0961	ciaH	SSA_0961	SSA_0960	Possible ketopantoate reductase PanE/ApbA, putative; GC: 39.3%; Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten; Protein involved in 2-dehydropantoate 2-reductase activity.	Sensor protein ciaH, putative; GC: 41.74%; Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.823. Curator(s): T. Kitten; Protein involved in transferase activity, transferring phosphorus-containing groups and establishment of competence for transformation.	0.739
SSA_0961	ciaR	SSA_0961	SSA_0959	Possible ketopantoate reductase PanE/ApbA, putative; GC: 39.3%; Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten; Protein involved in 2-dehydropantoate 2-reductase activity.	Two-component system, OmpR family, response regulator CiaR; GC: 40.59%; Codon Adaptation Index (CAI): 0.791. Curator(s): T. Kitten, J. Alves; Protein involved in sensory perception and establishment of competence for transformation.	0.739
ciaH	SSA_0958	SSA_0960	SSA_0958	Sensor protein ciaH, putative; GC: 41.74%; Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.823. Curator(s): T. Kitten; Protein involved in transferase activity, transferring phosphorus-containing groups and establishment of competence for transformation.	Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.	0.709
ciaH	SSA_0961	SSA_0960	SSA_0961	Sensor protein ciaH, putative; GC: 41.74%; Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.823. Curator(s): T. Kitten; Protein involved in transferase activity, transferring phosphorus-containing groups and establishment of competence for transformation.	Possible ketopantoate reductase PanE/ApbA, putative; GC: 39.3%; Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten; Protein involved in 2-dehydropantoate 2-reductase activity.	0.739
ciaH	ciaR	SSA_0960	SSA_0959	Sensor protein ciaH, putative; GC: 41.74%; Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.823. Curator(s): T. Kitten; Protein involved in transferase activity, transferring phosphorus-containing groups and establishment of competence for transformation.	Two-component system, OmpR family, response regulator CiaR; GC: 40.59%; Codon Adaptation Index (CAI): 0.791. Curator(s): T. Kitten, J. Alves; Protein involved in sensory perception and establishment of competence for transformation.	0.999
ciaR	SSA_0958	SSA_0959	SSA_0958	Two-component system, OmpR family, response regulator CiaR; GC: 40.59%; Codon Adaptation Index (CAI): 0.791. Curator(s): T. Kitten, J. Alves; Protein involved in sensory perception and establishment of competence for transformation.	Hypothetical protein; GC: 47.53%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten.	0.786
ciaR	SSA_0961	SSA_0959	SSA_0961	Two-component system, OmpR family, response regulator CiaR; GC: 40.59%; Codon Adaptation Index (CAI): 0.791. Curator(s): T. Kitten, J. Alves; Protein involved in sensory perception and establishment of competence for transformation.	Possible ketopantoate reductase PanE/ApbA, putative; GC: 39.3%; Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten; Protein involved in 2-dehydropantoate 2-reductase activity.	0.739
ciaR	ciaH	SSA_0959	SSA_0960	Two-component system, OmpR family, response regulator CiaR; GC: 40.59%; Codon Adaptation Index (CAI): 0.791. Curator(s): T. Kitten, J. Alves; Protein involved in sensory perception and establishment of competence for transformation.	Sensor protein ciaH, putative; GC: 41.74%; Transporter classification TC:2.A.21.9.2. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.823. Curator(s): T. Kitten; Protein involved in transferase activity, transferring phosphorus-containing groups and establishment of competence for transformation.	0.999

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About