STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0971Conserved uncharacterized protein; GC: 38.99%; Codon Adaptation Index (CAI): 0.777. Curator(s): T. Kitten. (582 aa)    
Predicted Functional Partners:
SSA_0972
Conserved hypothetical protein; GC: 43.91%; Codon Adaptation Index (CAI): 0.747. Curator(s): T. Kitten, J. Alves.
       0.851
SSA_0970
Conserved hypothetical protein; GC: 35.29%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.802. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.892); Curator(s): T. Kitten.
       0.780
SSA_0973
Hypothetical protein; GC: 39.1%; Codon Adaptation Index (CAI): 0.757. Curator(s): T. Kitten.
       0.753
comEC
Competence protein, putative; GC: 43.24%; Transporter classification TC:3.A.11.1.1. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.763. Helix-turn-helix prediction: AraC. Curator(s): X. Ge, J. Alves; Protein involved in establishment of competence for transformation.
  
  
 0.534
SSA_0969
Conserved hypothetical protein; GC: 35.16%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.736. SignalP prediction: Yes (prob. 0.892); Curator(s): T. Kitten.
       0.483
SSA_1100
Hemolysin exporter, ATPase component, putative; GC: 41.01%; Transporter classification TC:3.A.1.109.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves; Protein involved in ATPase activity, coupled to transmembrane movement of substances.
  
  
 0.456
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.