STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_0992Conserved hypothetical protein; GC: 43.47%; Codon Adaptation Index (CAI): 0.772. Curator(s): T. Kitten; Protein involved in transferase activity and N-acetyltransferase activity. (193 aa)    
Predicted Functional Partners:
SSA_0993
Conserved hypothetical protein; GC: 36.26%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.79. Curator(s): T. Kitten; Protein involved in transferase activity and S-adenosylmethionine-dependent methyltransferase activity.
  
    0.847
SSA_0994
Peptidase E, putative; GC: 41.55%; Codon Adaptation Index (CAI): 0.786. Curator(s): T. Kitten; Belongs to the peptidase S51 family.
 
     0.832
SSA_1313
Conserved hypothetical protein; GC: 44.6%; Codon Adaptation Index (CAI): 0.752. Helix-turn-helix prediction: AraC; Protein involved in regulation of transcription.
 
     0.543
SSA_0991
Deoxyribonuclease, putative; GC: 46.85%; Codon Adaptation Index (CAI): 0.777. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten; Protein involved in endonuclease activity.
       0.512
rnh
Ribonuclease HII, putative; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
    0.505
SSA_0667
Transcriptional regulator, putative; GC: 43.11%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu, J. Alves; Protein involved in regulation of transcription, DNA-dependent.
 
     0.428
SSA_0367
Conserved hypothetical protein; GC: 43.08%; Codon Adaptation Index (CAI): 0.77. Curator(s): T. Kitten; (possible metalloprotease); Protein involved in peptidase activity.
  
     0.421
SSA_1765
Conserved uncharacterized protein; GC: 30.98%; Codon Adaptation Index (CAI): 0.776; Protein involved in transferase activity.
  
     0.421
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.