STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_1002Alpha-galactosidase, putative; GC: 42.39%; Codon Adaptation Index (CAI): 0.767; Protein involved in carbohydrate metabolism. (720 aa)    
Predicted Functional Partners:
scrB
Sucrose-6-phosphate hydrolase, putative; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.927
SSA_0053
Beta-galactosidase, putative; GC: 48.1%; Codon Adaptation Index (CAI): 0.764. Curator(s): J. Alves; Protein involved in hydrolase activity and hydrolase activity, acting on glycosyl bonds; Belongs to the glycosyl hydrolase 35 family.
 
  
 0.918
SSA_0271
Glycosylhydrolase, family 35, putative; GC: 47.61%; Codon Adaptation Index (CAI): 0.773. Curator(s): P. Manque; Protein involved in hydrolase activity and hydrolase activity, acting on glycosyl bonds.
 
  
 0.918
galM
Aldose 1-epimerase, putative; Converts alpha-aldose to the beta-anomer.
  
 
 0.911
SSA_0419
Alpha-galactosidase, putative; GC: 49.46%; Codon Adaptation Index (CAI): 0.77. Curator(s): M. Chaplin; Protein involved in hydrolase activity, acting on glycosyl bonds and carbohydrate metabolism.
  
  
 
0.908
SSA_1144
Beta-N-acetylhexosaminidase, putative; GC: 42.05%; Codon Adaptation Index (CAI): 0.789; Protein involved in hydrolase activity, carbohydrate metabolism and cell adhesion.
     
 0.901
SSA_1003
ABC transporter substrate-binding protein-multiple sugars, putative; GC: 42.54%; Transporter classification TC:3.A.1.1.2. Codon Adaptation Index (CAI): 0.784. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1); Protein involved in transport.
 
  
 0.895
gtfA
Dextransucrase, putative; GC: 41.84%; Codon Adaptation Index (CAI): 0.798; Protein involved in transferase activity, transferring glycosyl groups, dextransucrase activity and carbohydrate metabolism.
 
  
 0.836
msmG
Sugar ABC transporter, permease protein, putative; GC: 37.65%; Transporter classification TC:3.A.1.1.2. Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.929).
 
    0.835
msmF
ABC transporter membrane-spanning permease-multiple sugars, putative; GC: 41.98%; Transporter classification TC:3.A.1.1.2. Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.743. SignalP prediction: Yes (prob. 0.537).
 
    0.786
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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