STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_1016Phosphoenolpyruvate synthase, putative; GC: 48.35%; Codon Adaptation Index (CAI): 0.78; Protein involved in transferase activity, transferring phosphorus-containing groups. (827 aa)    
Predicted Functional Partners:
UbiA
4-hydroxybenzoate octaprenyltransferase, putative; GC: 44.44%; Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.789.
 
     0.947
SSA_1017
Conserved hypothetical protein; GC: 44.29%; Codon Adaptation Index (CAI): 0.787.
 
    0.947
SSA_1011
Conserved hypothetical protein; GC: 46.7%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.747. SignalP prediction: Yes (prob. 0.457); Protein involved in phosphatidate cytidylyltransferase activity.
 
     0.937
SSA_1013
Phosphatidylserine synthase, putative; GC: 49.13%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.783; Protein involved in transferase activity.
 
    0.902
SSA_1014
Phosphatidylserine decarboxylase proenzyme 2, putative; GC: 46.85%; Codon Adaptation Index (CAI): 0.748; Protein involved in phospholipid biosynthesis; Belongs to the phosphatidylserine decarboxylase family.
 
    0.870
SSA_1012
Phosphoenolpyruvate synthase, putative; GC: 47.2%; Codon Adaptation Index (CAI): 0.768; Protein involved in transferase activity, transferring phosphorus-containing groups.
 
    
0.839
crpA
CshA-like fibrillar surface protein A; GC: 46.68%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.801. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): L. Ozaki, J. Alves; Protein involved in calcium ion binding and pathogenesis.
  
     0.709
crpC
CshA-like fibrillar surface protein C; GC: 46.28%; Codon Adaptation Index (CAI): 0.794. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten, J. Alves; Protein involved in pathogenesis.
  
     0.708
crpB
CshA-like fibrillar surface protein B; GC: 46.38%; Codon Adaptation Index (CAI): 0.797. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten, J. Alves; Protein involved in pathogenesis.
  
     0.705
SSA_1454
Conserved hypothetical protein; GC: 41.25%; Codon Adaptation Index (CAI): 0.771. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1).
  
     0.664
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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