STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amyAlpha-amylase, putative; GC: 44.04%; Codon Adaptation Index (CAI): 0.77; Protein involved in carbohydrate metabolism. (488 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme, putative; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.954
pulI
Pullulanase, putative; GC: 45.69%; Codon Adaptation Index (CAI): 0.782; Protein involved in carbohydrate binding, pullulanase activity and carbohydrate metabolism; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.950
pulA
Type II secretory pathway, pullulanase PulA glycosidase, putative; GC: 47.76%; Codon Adaptation Index (CAI): 0.759; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.949
malQ
4-alpha-glucanotransferase, putative; GC: 46.49%; Codon Adaptation Index (CAI): 0.81. Helix-turn-helix prediction: AraC; Protein involved in transferase activity.
  
 
 0.919
glgP
Glycogen phosphorylase, putative; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.918
malP
Maltodextrin phosphorylase, putative; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.918
dexB
Neopullulanase, putative; GC: 41.71%; Codon Adaptation Index (CAI): 0.767. Curator(s): J. Alves; Protein involved in hydrolase activity, neopullulanase activity and carbohydrate metabolism; Belongs to the glycosyl hydrolase 13 family.
  
  
0.912
rgfB
Conserved hypothetical protein; GC: 45.34%; Codon Adaptation Index (CAI): 0.786.
  
 
  0.905
ccpA
Catabolite control protein A, putative; GC: 43.08%; Codon Adaptation Index (CAI): 0.795. Helix-turn-helix prediction: AraC; Protein involved in regulation of transcription.
  
  
 0.746
SSA_1752
Phosphotransferase system, trehalose-specific IIBC component, putative; GC: 44.53%; Transporter classification TC:4.A.1.2.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.774.
 
  
 0.686
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.