STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_1065Beta-hexosamidase A, putative; GC: 45.47%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.766. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Protein involved in hydrolase activity, acting on glycosyl bonds, hydrolase activity and carbohydrate metabolism. (930 aa)    
Predicted Functional Partners:
SSA_1144
Beta-N-acetylhexosaminidase, putative; GC: 42.05%; Codon Adaptation Index (CAI): 0.789; Protein involved in hydrolase activity, carbohydrate metabolism and cell adhesion.
    
 0.915
SSA_0332
Conserved hypothetical protein; GC: 47.22%; Codon Adaptation Index (CAI): 0.783. Curator(s): T. Kitten; Protein involved in response to antibiotic.
  
 0.869
SSA_0159
Conserved hypothetical protein; GC: 40.92%; Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.
  
  
 0.592
SSA_0379
PTS system, beta-glucoside-specific EII component, putative; GC: 44.98%; Transporter classification TC:4.A.1.2.6. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.805. Curator(s): T. Kitten.
  
  
 0.491
scrA
Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific, putative; GC: 42.12%; Transporter classification TC:4.A.1.2.1. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.809. Curator(s): M. Chaplin.
  
  
 0.491
SSA_1752
Phosphotransferase system, trehalose-specific IIBC component, putative; GC: 44.53%; Transporter classification TC:4.A.1.2.4. Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.774.
  
  
 0.491
ptsG
PTS system glucose-specific EIIC BA component (EIICBA-Glc) (EII- Glc/EIII-Glc), putative; GC: 43.23%; Transporter classification TC:4.A.1.1.2. Transmembrane domains: 9. Codon Adaptation Index (CAI): 0.798.
  
  
 0.491
folK
Bifunctional folate synthesis protein, putative; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
     
 0.467
SSA_1064
Conserved hypothetical protein; GC: 40.49%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.761. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): J. Alves; (contains glucan-binding domain); Protein involved in dextransucrase activity.
       0.460
Arb
6-phospho-beta-glucosidase, putative; GC: 49.38%; Codon Adaptation Index (CAI): 0.775. Curator(s): T. Kitten; Protein involved in hydrolase activity, acting on glycosyl bonds; Belongs to the glycosyl hydrolase 1 family.
     
 0.451
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.