STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
noxH2O-forming NADH dehydrogenase, putative; GC: 40.38%; Codon Adaptation Index (CAI): 0.812. Curator(s): J. Alves. (458 aa)    
Predicted Functional Partners:
SSA_1415
Oxidoreductase, putative; GC: 49.41%; Codon Adaptation Index (CAI): 0.769. LipoP prediction: SpI; Protein involved in oxidoreductase activity.
  
 
 0.985
SSA_0872
Zn-dependent hydrolases, including glyoxylases, putative; GC: 45.85%; Codon Adaptation Index (CAI): 0.773. Curator(s): L. Ozaki.
  
 0.779
SSA_2348
Metal dependent hydrolase, putative; GC: 45.63%; Codon Adaptation Index (CAI): 0.79; Protein involved in hydrolase activity.
   
 0.775
SSA_1128
Voltage gated chloride channel EriC, putative; GC: 46.11%; Transporter classification TC:1.A.11.5.1. Transmembrane domains: 11. Codon Adaptation Index (CAI): 0.775. Curator(s): J. Alves.
 
   
 0.754
sodA
Mn/Fe-dependent superoxide dismutase, putative; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.743
apbE
Thiamine biosynthesis lipoprotein, putative; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
     
 0.708
rpmJ
50S ribosomal protein L36, putative; GC: 38.46%; Codon Adaptation Index (CAI): 0.838. Curator(s): M. Serrano; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.639
uncD
Proton-translocating ATPase, F1 sector, beta subunit, putative; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 
 0.605
SSA_1130
Iron-dependent peroxidase, putative; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
     
 0.603
rex
AT-rich DNA-binding protein, possible redox-sensing transcriptional repressor, putative; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
      
 0.596
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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