cpbA protein (Streptococcus sanguinis SK36) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

cpbA

Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten. (1511 aa)

Predicted Functional Partners:

SSA_2282

0.492

SSA_2283

0.482

SSA_1662

0.467

ukp

0.420

SSA_2277

0.415

Your Current Organism:

Streptococcus sanguinis SK36

NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SSA_1662	cpbA	SSA_1662	SSA_1663	NADH-dependent oxidoreductase, putative; GC: 45.37%; Codon Adaptation Index (CAI): 0.783; Protein involved in oxidoreductase activity.	Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten.	0.467
SSA_2277	SSA_2282	SSA_2277	SSA_2282	DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.	Phage infection protein, putative; GC: 40.76%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).	0.961
SSA_2277	SSA_2283	SSA_2277	SSA_2283	DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.	Conserved uncharacterized protein; GC: 35.76%; Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves; Belongs to the WXG100 family.	0.974
SSA_2277	cpbA	SSA_2277	SSA_1663	DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.	Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten.	0.415
SSA_2277	ukp	SSA_2277	SSA_2278	DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.	Ukp protein, putative; GC: 45.48%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.	0.989
SSA_2282	SSA_2277	SSA_2282	SSA_2277	Phage infection protein, putative; GC: 40.76%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).	DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.	0.961
SSA_2282	SSA_2283	SSA_2282	SSA_2283	Phage infection protein, putative; GC: 40.76%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).	Conserved uncharacterized protein; GC: 35.76%; Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves; Belongs to the WXG100 family.	0.934
SSA_2282	cpbA	SSA_2282	SSA_1663	Phage infection protein, putative; GC: 40.76%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).	Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten.	0.492
SSA_2282	ukp	SSA_2282	SSA_2278	Phage infection protein, putative; GC: 40.76%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).	Ukp protein, putative; GC: 45.48%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.	0.976
SSA_2283	SSA_2277	SSA_2283	SSA_2277	Conserved uncharacterized protein; GC: 35.76%; Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves; Belongs to the WXG100 family.	DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.	0.974
SSA_2283	SSA_2282	SSA_2283	SSA_2282	Conserved uncharacterized protein; GC: 35.76%; Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves; Belongs to the WXG100 family.	Phage infection protein, putative; GC: 40.76%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).	0.934
SSA_2283	cpbA	SSA_2283	SSA_1663	Conserved uncharacterized protein; GC: 35.76%; Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves; Belongs to the WXG100 family.	Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten.	0.482
SSA_2283	ukp	SSA_2283	SSA_2278	Conserved uncharacterized protein; GC: 35.76%; Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves; Belongs to the WXG100 family.	Ukp protein, putative; GC: 45.48%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.	0.961
cpbA	SSA_1662	SSA_1663	SSA_1662	Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten.	NADH-dependent oxidoreductase, putative; GC: 45.37%; Codon Adaptation Index (CAI): 0.783; Protein involved in oxidoreductase activity.	0.467
cpbA	SSA_2277	SSA_1663	SSA_2277	Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten.	DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.	0.415
cpbA	SSA_2282	SSA_1663	SSA_2282	Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten.	Phage infection protein, putative; GC: 40.76%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).	0.492
cpbA	SSA_2283	SSA_1663	SSA_2283	Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten.	Conserved uncharacterized protein; GC: 35.76%; Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves; Belongs to the WXG100 family.	0.482
cpbA	ukp	SSA_1663	SSA_2278	Collagen-binding protein A; GC: 43.92%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): T. Kitten.	Ukp protein, putative; GC: 45.48%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.	0.420
ukp	SSA_2277	SSA_2278	SSA_2277	Ukp protein, putative; GC: 45.48%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.	DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.	0.989
ukp	SSA_2282	SSA_2278	SSA_2282	Ukp protein, putative; GC: 45.48%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.	Phage infection protein, putative; GC: 40.76%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).	0.976

page 1 of 2

Server load: low (34%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Textmining

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About