STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_1972Two-component system, NarL family, response regulator DesR; GC: 47.67%; Codon Adaptation Index (CAI): 0.738. Curator(s): J. Alves; Protein involved in sensory perception. (199 aa)    
Predicted Functional Partners:
SSA_1973
Histidine kinase, putative; GC: 42.78%; Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.764; Protein involved in protein dimerization activity.
 0.998
SSA_1974
ABC-type multidrug transport system, permease component, putative; GC: 41.63%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. Curator(s): J. Alves; Protein involved in ATPase activity, coupled to transmembrane movement of substances.
 
  
 0.959
SSA_1975
ABC-type multidrug transport system, ATPase component, putative; GC: 43.26%; Transporter classification TC:3.A.1.102.1. Codon Adaptation Index (CAI): 0.788. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.
  
 0.917
SSA_0216
Histidine kinase, putative; GC: 44.98%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.745. Curator(s): P. Manque; Protein involved in protein dimerization activity.
 
 0.875
SSA_1843
Histidine kinase, putative; GC: 43.04%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.767; Protein involved in protein dimerization activity.
 
 
 0.874
SSA_1685
Two-component response transcriptional regulator; GC: 45.71%; Codon Adaptation Index (CAI): 0.762. Curator(s): J. Alves; Protein involved in sensory perception and regulation of transcription, DNA-dependent.
  
 
 0.462
SSA_0218
Sugar-binding periplasmic protein, putative; GC: 46.65%; Transporter classification TC:3.A.1.1.16. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.787. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Curator(s): P. Manque; Protein involved in transport.
 
    0.458
rbsB
Periplasmic sugar-binding protein (ribose porter), putative; GC: 45.49%; Transporter classification TC:3.A.1.2.1. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.762. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.516); Curator(s): P. Manque, J. Alves.
 
  
 0.457
pkn
Serine/threonine protein kinase, putative; GC: 45.95%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.786; Protein involved in transferase activity.
 
   
 0.423
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.