STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_2017Hypothetical protein (possibly membrane-associated); GC: 43.14%; Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.756. Curator(s): J. Alves. (298 aa)    
Predicted Functional Partners:
SSA_2018
Conserved hypothetical protein; GC: 49.93%; Codon Adaptation Index (CAI): 0.763; Protein involved in molecular function unknown.
       0.492
SSA_2019
Conserved hypothetical protein; GC: 40.45%; Codon Adaptation Index (CAI): 0.783; Protein involved in amino acid binding.
       0.489
SSA_2016
Phosphoglycerate mutase, putative; GC: 50.28%; Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves; Protein involved in phosphoglycerate mutase activity.
       0.484
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.