STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_2020Conserved hypothetical protein; GC: 49.45%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.78. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Protein involved in proteolysis. (1035 aa)    
Predicted Functional Partners:
SSA_0620
Conserved hypothetical protein; GC: 48.27%; Codon Adaptation Index (CAI): 0.75. Curator(s): P. Xu.
  
     0.563
bta
Bta, putative; GC: 42.24%; Codon Adaptation Index (CAI): 0.826; Protein involved in electron transport and drug transport.
  
     0.544
SSA_1028
Transcriptional repressor, XRE family, putative; GC: 42.12%; Codon Adaptation Index (CAI): 0.735. Curator(s): J. Alves; Protein involved in serine-type peptidase activity.
  
     0.466
SSA_2018
Conserved hypothetical protein; GC: 49.93%; Codon Adaptation Index (CAI): 0.763; Protein involved in molecular function unknown.
       0.456
SSA_1591
Dipeptidase, putative; GC: 46.12%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.776. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.927); Protein involved in dipeptidase activity and hydrolase activity.
  
     0.451
SSA_1593
Dipeptidase, putative; GC: 44.38%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998); Protein involved in dipeptidase activity and hydrolase activity.
  
     0.450
SSA_2019
Conserved hypothetical protein; GC: 40.45%; Codon Adaptation Index (CAI): 0.783; Protein involved in amino acid binding.
       0.448
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.