| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SSA_2118 | SSA_2120 | SSA_2118 | SSA_2120 | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.986 |
| SSA_2118 | cbf | SSA_2118 | SSA_2116 | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | Cmp-binding-factor 1, putative; GC: 45.82%; Codon Adaptation Index (CAI): 0.787; Protein involved in nucleic acid binding. | 0.855 |
| SSA_2118 | purR | SSA_2118 | SSA_2114 | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | Transcriptional repressor of purine operon, putative; GC: 41.49%; Codon Adaptation Index (CAI): 0.761. Curator(s): J. Alves; Protein involved in negative regulation of purine base metabolism. | 0.789 |
| SSA_2118 | rmuC | SSA_2118 | SSA_2117 | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | DNA recombination protein RmuC, putative; GC: 46.7%; Codon Adaptation Index (CAI): 0.775. Curator(s): J. Alves; Protein involved in lipoprotein metabolism. | 0.855 |
| SSA_2118 | rnmV | SSA_2118 | SSA_2125 | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | Small primase-like protein (Toprim domain), putative; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.438 |
| SSA_2118 | rpe | SSA_2118 | SSA_2119 | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | Pentose-5-phosphate-3-epimerase, putative; GC: 46.06%; Codon Adaptation Index (CAI): 0.811; Protein involved in isomerase activity; Belongs to the ribulose-phosphate 3-epimerase family. | 0.905 |
| SSA_2118 | rpsG | SSA_2118 | SSA_2110 | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | 30S ribosomal protein S7, putative; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.622 |
| SSA_2118 | rpsL | SSA_2118 | SSA_2111 | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | 30S ribosomal protein S12, putative; With S4 and S5 plays an important role in translational accuracy. | 0.632 |
| SSA_2120 | SSA_2118 | SSA_2120 | SSA_2118 | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | 0.986 |
| SSA_2120 | cbf | SSA_2120 | SSA_2116 | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Cmp-binding-factor 1, putative; GC: 45.82%; Codon Adaptation Index (CAI): 0.787; Protein involved in nucleic acid binding. | 0.849 |
| SSA_2120 | purR | SSA_2120 | SSA_2114 | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Transcriptional repressor of purine operon, putative; GC: 41.49%; Codon Adaptation Index (CAI): 0.761. Curator(s): J. Alves; Protein involved in negative regulation of purine base metabolism. | 0.755 |
| SSA_2120 | rmuC | SSA_2120 | SSA_2117 | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | DNA recombination protein RmuC, putative; GC: 46.7%; Codon Adaptation Index (CAI): 0.775. Curator(s): J. Alves; Protein involved in lipoprotein metabolism. | 0.849 |
| SSA_2120 | rnmV | SSA_2120 | SSA_2125 | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Small primase-like protein (Toprim domain), putative; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.436 |
| SSA_2120 | rpe | SSA_2120 | SSA_2119 | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Pentose-5-phosphate-3-epimerase, putative; GC: 46.06%; Codon Adaptation Index (CAI): 0.811; Protein involved in isomerase activity; Belongs to the ribulose-phosphate 3-epimerase family. | 0.956 |
| SSA_2120 | rpsG | SSA_2120 | SSA_2110 | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 30S ribosomal protein S7, putative; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.763 |
| SSA_2120 | rpsL | SSA_2120 | SSA_2111 | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 30S ribosomal protein S12, putative; With S4 and S5 plays an important role in translational accuracy. | 0.897 |
| cbf | SSA_2118 | SSA_2116 | SSA_2118 | Cmp-binding-factor 1, putative; GC: 45.82%; Codon Adaptation Index (CAI): 0.787; Protein involved in nucleic acid binding. | Thiamine pyrophosphokinase, putative; GC: 43.09%; Codon Adaptation Index (CAI): 0.788. SignalP prediction: Yes (prob. 0.452); Curator(s): J. Alves; Protein involved in thiamin diphosphate biosynthesis. | 0.855 |
| cbf | SSA_2120 | SSA_2116 | SSA_2120 | Cmp-binding-factor 1, putative; GC: 45.82%; Codon Adaptation Index (CAI): 0.787; Protein involved in nucleic acid binding. | GTPase, putative; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.849 |
| cbf | elaC | SSA_2116 | SSA_1430 | Cmp-binding-factor 1, putative; GC: 45.82%; Codon Adaptation Index (CAI): 0.787; Protein involved in nucleic acid binding. | Ribonuclease Z, putative; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.670 |
| cbf | purR | SSA_2116 | SSA_2114 | Cmp-binding-factor 1, putative; GC: 45.82%; Codon Adaptation Index (CAI): 0.787; Protein involved in nucleic acid binding. | Transcriptional repressor of purine operon, putative; GC: 41.49%; Codon Adaptation Index (CAI): 0.761. Curator(s): J. Alves; Protein involved in negative regulation of purine base metabolism. | 0.759 |
