Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
jagRNA-binding protein, Jag family, putative; GC: 45.81%; Codon Adaptation Index (CAI): 0.791. Curator(s): J. Alves; Protein involved in nucleic acid binding. (341 aa)    
Predicted Functional Partners:
SSA_1309
RNA-binding protein (KH domain), putative; GC: 39.17%; Codon Adaptation Index (CAI): 0.765. Curator(s): J. Alves; Protein involved in nucleic acid binding; Belongs to the UPF0109 family.
  
 
 0.934
yidC-2
Membrane protein (preprotein translocase) oxaA 1 precursor, putative; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.
  
  
 0.919
rnpA
Ribonuclease P protein component, putative; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
  
 0.910
SSA_2137
Conserved hypothetical protein; GC: 48.82%; Codon Adaptation Index (CAI): 0.75. Curator(s): J. Alves; possible sakacin A production response transcriptional regulator sapR.
       0.775
rpmH
50S ribosomal protein L34, putative; GC: 47.41%; Codon Adaptation Index (CAI): 0.849; Belongs to the bacterial ribosomal protein bL34 family.
     
 0.730
gidB
Methyltransferase gidB, putative; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.652
argH
Argininosuccinate lyase, putative; GC: 48.08%; Codon Adaptation Index (CAI): 0.781; Protein involved in lyase activity.
       0.652
argG
Argininosuccinate synthase, putative; GC: 47.67%; Codon Adaptation Index (CAI): 0.765; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.645
yidC
Preprotein translocase subunit YidC, putative; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.
  
  
 0.595
SSA_0577
Ancient RNA-binding IF3-C fold (CRS1/YhbY domain), putative; GC: 44.23%; Codon Adaptation Index (CAI): 0.77. Curator(s): D. Akan, J. Alves; Protein involved in molecular function unknown.
  
   
 0.581
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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