STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
estATributyrin esterase, putative; GC: 47.82%; Codon Adaptation Index (CAI): 0.781; Protein involved in catalytic activity. (259 aa)    
Predicted Functional Partners:
rnj-2
Metallo-beta-lactamase, putative; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.748
SSA_1782
Conserved hypothetical protein; GC: 45.59%; Codon Adaptation Index (CAI): 0.752; Protein involved in molecular function unknown and hydrolase activity.
  
  
 0.694
gltX
Glutamyl-tRNA synthetase, putative; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.590
SSA_0332
Conserved hypothetical protein; GC: 47.22%; Codon Adaptation Index (CAI): 0.783. Curator(s): T. Kitten; Protein involved in response to antibiotic.
     
 0.582
SSA_0794
Zn-dependent protease, putative; GC: 47.22%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.753. SignalP prediction: Yes (prob. 0.542); Curator(s): X. Ge; Protein involved in hydrolase activity and proteolysis.
       0.450
uup
ABC-NBD transporters with duplicated ATPase domains, putative; GC: 50.74%; Transporter classification TC:3.A.1.120.1. Codon Adaptation Index (CAI): 0.763. Curator(s): X. Ge, J. Alves; Protein involved in nucleoside-triphosphatase activity.
       0.450
SSA_0908
ABC-type uncharacterized transport system, periplasmic component, putative; GC: 44.25%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.809. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.999); Curator(s): T. Kitten, J. Alves.
       0.450
folK
Bifunctional folate synthesis protein, putative; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.449
SSA_2152
ABC-type transporter (uncharacterized), ATPase component, putative; GC: 45.85%; Transporter classification TC:3.A.1.12.4. Codon Adaptation Index (CAI): 0.736. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.
       0.447
SSA_2153
ABC-type transporter (uncharacterized), permease component, putative; GC: 49.25%; Transporter classification TC:3.A.1.2.1. Transmembrane domains: 8. Codon Adaptation Index (CAI): 0.758. Curator(s): J. Alves; Belongs to the binding-protein-dependent transport system permease family.
       0.447
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.