STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_2161NTP pyrophosphohydrolases including oxidative damage repair enzymes, putative; GC: 41.11%; Codon Adaptation Index (CAI): 0.772; Protein involved in hydrolase activity. (149 aa)    
Predicted Functional Partners:
SSA_2162
Hypothetical protein; GC: 32.64%; Codon Adaptation Index (CAI): 0.765.
       0.563
dut
Deoxyuridinetriphosphatase, putative; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
     
 0.562
SSA_2159
Conserved hypothetical protein; GC: 47.09%; Codon Adaptation Index (CAI): 0.774.
       0.550
mutX
Mutator protein, putative; GC: 46.24%; Codon Adaptation Index (CAI): 0.785; Protein involved in hydrolase activity; Belongs to the Nudix hydrolase family.
  
     0.536
SSA_2158
Methyltransferase, putative; GC: 40.76%; Codon Adaptation Index (CAI): 0.766. Helix-turn-helix prediction: AraC; Protein involved in transferase activity.
       0.445
labT
Conserved hypothetical protein; GC: 39.69%; Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.766.
  
    0.403
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.