STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_2164Glutamine amidotransferase, putative; GC: 44.64%; Codon Adaptation Index (CAI): 0.794; Protein involved in transferase activity and hydrolase activity. (229 aa)    
Predicted Functional Partners:
tag
GC: 40.54%; Codon Adaptation Index (CAI): 0.813; Protein involved in DNA-3-methyladenine glycosylase I activity.
      
 0.510
SSA_1736
L-cysteine desulfhydrase, putative; GC: 45.5%; Codon Adaptation Index (CAI): 0.794; Protein involved in 1-aminocyclopropane-1-carboxylate synthase activity.
     
 0.509
oppA
ABC-type oligopeptide transporter, periplasmic component, putative; GC: 45.24%; Transporter classification TC:3.A.1.5.2. Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.782. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1); Curator(s): J. Alves; Protein involved in transport.
       0.472
glnA
Glutamine synthetase type 1, putative; GC: 45.06%; Codon Adaptation Index (CAI): 0.803. Curator(s): T. Kitten; Protein involved in ligase activity; Belongs to the glutamine synthetase family.
  
  
 0.461
rex
AT-rich DNA-binding protein, possible redox-sensing transcriptional repressor, putative; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.408
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.