STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dapD2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. (232 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase, putative; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
 
 
 0.985
hipO
Aminoacylase/N-acyl-L-amino acid amidohydrolase/hippurate hydrolase, putative; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.
 
  
 0.945
argD
Acetylornithine aminotransferase, putative; GC: 47.94%; Codon Adaptation Index (CAI): 0.776. Curator(s): X. Ge; Protein involved in pyridoxal phosphate binding; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
  
 0.934
asd
Aspartate-semialdehyde dehydrogenase, putative; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 0.926
lysC
Aspartate kinase, putative; GC: 41.5%; Codon Adaptation Index (CAI): 0.796; Protein involved in amino acid binding; Belongs to the aspartokinase family.
 
  
 0.773
dapA
Dihydrodipicolinate synthase, putative; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
  
 0.761
SSA_2170
Conserved hypothetical protein; GC: 41.37%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.774. SignalP prediction: Yes (prob. 0.942).
       0.725
SSA_2171
Conserved hypothetical protein; GC: 44.88%; Codon Adaptation Index (CAI): 0.783; Protein involved in 5-formyltetrahydrofolate cyclo-ligase activity and metabolism; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.725
lysA
Diaminopimelate decarboxylase, putative; GC: 46.68%; Codon Adaptation Index (CAI): 0.806; Protein involved in lyase activity and lysine biosynthesis via diaminopimelate.
  
  
 0.696
guaA
GMP synthase [glutamine-hydrolyzing], putative; Catalyzes the synthesis of GMP from XMP.
   
  
 0.682
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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